# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.225 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.53  113.9  19.48
4.3  Radius of line 5 at 3.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.36  114.04  19.44
4.3  Radius of line 6 at 3.125 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.18  114.18  19.39
4.3  Radius of line 7 at 3.055 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.78  114.23  19.35
4.3  Radius of line 8 at 2.99 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.4  114.04  19.3
4.3  Radius of line 9 at 2.93 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  206.06  113.75  19.26
4.3  Radius of line 10 at 2.885 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  205.78  113.45  19.26
4.3  Radius of line 1582 at 2.9 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.28  114.43  19.96
4.5  Radius of terminal line 5573 at 0.255 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  214.11  112.98  12.24
2.4  Seg length ending at pt. 1570 >= 6.0 stdevs above mean at 1.0898.  (no action taken)
     B1      X, Y, Z:  197.49  103.29  30.14
2.4  Seg length ending at pt. 2906 >= 6.0 stdevs above mean at 1.0917.  (no action taken)
     B1      X, Y, Z:  187.59  115.82  27.05
2.4  Seg length ending at pt. 3039 >= 6.0 stdevs above mean at 1.099.  (no action taken)
     B1      X, Y, Z:  193.15  123.95  37.1
2.4  Seg length ending at pt. 3427 >= 6.0 stdevs above mean at 1.0882.  (no action taken)
     B1      X, Y, Z:  209.66  136.81  23.94
2.4  Seg length ending at pt. 4392 >= 6.0 stdevs above mean at 1.5148.  (no action taken)
     B1      X, Y, Z:  207.71  114.01  17.98
2.4  Seg length ending at pt. 4696 >= 6.0 stdevs above mean at 1.4431.  (no action taken)
     B1      X, Y, Z:  208.25  114.06  18.82
2.5  Seg length ending at pt. 5158 <= 0.1 at 0.0917.  (removed)
     A       X, Y, Z:  220.54  124.28  25.05
2.6  Line 4340 and line 4353 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  202.53  124.4  11.15
2.1  Line 1 has 3 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  207.81  113.48  19.66
2.1  Line 5157 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  220.5  124.2  25.03
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 18
Number of type B2 irregularities = 0
Number of type C irregularities = 0
