# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia4.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.28  275.63  16.62
4.3  Radius of line 5 at 3.025 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.38  275.22  16.23
4.3  Radius of line 3610 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.28  275.63  16.62
4.3  Radius of line 3611 at 3.145 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.41  276.1  16.39
4.3  Radius of line 3612 at 3.035 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  247.34  276.43  16.26
4.5  Radius of terminal line 4161 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  240.74  278.02  18.87
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  247.28  275.63  16.62
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0374.  (removed)
     A       X, Y, Z:  247.39  275.19  16.21
2.5  Seg length ending at pt. 8 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  247.39  275.13  16.13
2.4  Seg length ending at pt. 547 >= 6.0 stdevs above mean at 1.2138.  (no action taken)
     B1      X, Y, Z:  242.77  245.38  27.21
2.4  Seg length ending at pt. 754 >= 6.0 stdevs above mean at 1.4923.  (no action taken)
     B1      X, Y, Z:  247.91  275.29  17.41
2.4  Seg length ending at pt. 1085 >= 6.0 stdevs above mean at 1.1346.  (no action taken)
     B1      X, Y, Z:  256.76  263.05  31.85
2.4  Seg length ending at pt. 2998 >= 6.0 stdevs above mean at 1.2578.  (no action taken)
     B1      X, Y, Z:  262.62  274.43  30.73
2.4  Seg length ending at pt. 3055 >= 6.0 stdevs above mean at 1.0857.  (no action taken)
     B1      X, Y, Z:  257.37  279.17  32.24
2.4  Seg length ending at pt. 3429 >= 6.0 stdevs above mean at 1.1685.  (no action taken)
     B1      X, Y, Z:  251.56  264.25  14.26
2.4  Seg length ending at pt. 3461 >= 6.0 stdevs above mean at 1.1037.  (no action taken)
     B1      X, Y, Z:  250.33  266.98  9.1
2.4  Seg length ending at pt. 3601 >= 6.0 stdevs above mean at 1.0706.  (no action taken)
     B1      X, Y, Z:  238.19  277.36  21.32
2.5  Seg length ending at pt. 3610 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  247.28  275.63  16.62
2.4  Seg length ending at pt. 4132 >= 6.0 stdevs above mean at 1.2458.  (no action taken)
     B1      X, Y, Z:  248.96  281.3  10.59
2.5  Seg length ending at pt. 7 <= 0.1 at 0.0714.  (removed)
     A       X, Y, Z:  247.39  275.17  16.18
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  247.28  275.63  16.62
2.1  Line 5 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  247.38  275.22  16.23
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 17
Number of type B2 irregularities = 0
Number of type C irregularities = 0
