# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia2.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
4.3  Radius of line 2229 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
4.3  Radius of line 2317 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
4.3  Radius of line 2457 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
4.5  Radius of terminal line 2480 at 0.205 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  183.06  37.53  3.15
2.5  Seg length ending at pt. 3 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  179.1  32.55  12.49
2.4  Seg length ending at pt. 1474 >= 6.0 stdevs above mean at 1.1113.  (no action taken)
     B1      X, Y, Z:  170.97  9.18  21.15
2.4  Seg length ending at pt. 1530 >= 6.0 stdevs above mean at 1.1353.  (no action taken)
     B1      X, Y, Z:  173.2  18.53  18.34
2.4  Seg length ending at pt. 1649 >= 6.0 stdevs above mean at 1.0935.  (no action taken)
     B1      X, Y, Z:  172.89  16.11  22.35
2.4  Seg length ending at pt. 1797 >= 6.0 stdevs above mean at 1.1476.  (no action taken)
     B1      X, Y, Z:  167.28  26.37  18.25
2.5  Seg length ending at pt. 2457 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  179.2  32.71  12.56
2.4  Seg length ending at pt. 2458 >= 6.0 stdevs above mean at 1.3187.  (no action taken)
     B1      X, Y, Z:  179.64  32.89  11.33
2.6  Line 1 and line 2229 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
2.6  Line 1 and line 2317 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  179.2  32.71  12.56
2.6  Line 2229 and line 2318 have the same coordinates.  (second line removed)
     A      X, Y, Z:  179.2  32.71  12.56
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  179.15  32.63  12.52
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
