# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia10.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN16_microglia10.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.45  106.15  33.47
4.3  Radius of line 5 at 3.29 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.17  105.95  33.64
4.3  Radius of line 6 at 3.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.84  105.73  33.65
4.3  Radius of line 7 at 3.14 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.51  105.68  33.53
4.3  Radius of line 8 at 3.08 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  117.21  105.89  33.36
4.3  Radius of line 9 at 3.025 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.93  106.2  33.31
4.3  Radius of line 10 at 2.985 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.6  106.39  33.39
4.3  Radius of line 11 at 2.945 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.28  106.37  33.54
4.3  Radius of line 12 at 2.905 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.95  106.28  33.7
4.3  Radius of line 13 at 2.875 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.64  106.21  33.82
4.3  Radius of line 14 at 2.845 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.32  106.23  33.96
4.3  Radius of line 15 at 2.815 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.03  106.26  34.11
4.3  Radius of line 16 at 2.785 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.75  106.26  34.29
4.3  Radius of line 17 at 2.76 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.48  106.21  34.46
4.3  Radius of line 18 at 2.74 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  114.25  106.09  34.6
4.3  Radius of line 3115 at 3.035 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.07  105.54  33.67
4.3  Radius of line 3116 at 2.94 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.09  105.15  33.59
4.3  Radius of line 3117 at 2.86 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.23  104.82  33.39
4.3  Radius of line 3118 at 2.795 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.43  104.57  33.14
4.3  Radius of line 3119 at 2.74 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.68  104.37  32.92
4.3  Radius of line 5099 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.45  106.15  33.47
4.3  Radius of line 5100 at 2.885 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  118.12  106.73  33.38
4.5  Radius of terminal line 5479 at 0.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  121.68  110.98  27.48
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  118.45  106.15  33.47
2.5  Seg length ending at pt. 545 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  78.75  112.75  9.18
2.4  Seg length ending at pt. 1047 >= 6.0 stdevs above mean at 1.092.  (no action taken)
     B1      X, Y, Z:  89.56  103.31  32.77
2.4  Seg length ending at pt. 1054 >= 6.0 stdevs above mean at 1.0791.  (no action taken)
     B1      X, Y, Z:  89.76  103.28  31.71
2.4  Seg length ending at pt. 1976 >= 6.0 stdevs above mean at 1.2615.  (no action taken)
     B1      X, Y, Z:  93.89  92.73  24.32
2.4  Seg length ending at pt. 2053 >= 6.0 stdevs above mean at 1.2117.  (no action taken)
     B1      X, Y, Z:  87.29  91.93  35.75
2.4  Seg length ending at pt. 2634 >= 6.0 stdevs above mean at 1.038.  (no action taken)
     B1      X, Y, Z:  89.81  111.98  32.9
2.4  Seg length ending at pt. 2978 >= 6.0 stdevs above mean at 1.1546.  (no action taken)
     B1      X, Y, Z:  117.82  106.01  34.77
2.4  Seg length ending at pt. 3986 >= 6.0 stdevs above mean at 1.1895.  (no action taken)
     B1      X, Y, Z:  108.7  94.71  26.71
2.5  Seg length ending at pt. 4722 <= 0.1 at 0.0412.  (removed)
     A       X, Y, Z:  112.76  93.74  40.36
2.5  Seg length ending at pt. 4724 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  112.75  93.77  40.49
2.5  Seg length ending at pt. 5099 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  118.45  106.15  33.47
2.4  Seg length ending at pt. 5259 >= 6.0 stdevs above mean at 1.2016.  (no action taken)
     B1      X, Y, Z:  107.46  108.81  40.59
2.5  Seg length ending at pt. 4723 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  112.75  93.75  40.4
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  118.45  106.15  33.47
2.1  Line 544 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  78.67  112.79  9.17
2.1  Line 4721 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  112.76  93.73  40.32
 
 


Number of type A irregularities = 6
Number of type B1 irregularities = 34
Number of type B2 irregularities = 0
Number of type C irregularities = 0
