# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN15_microglia12.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN15_microglia12.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.32  241.13  38.84
4.3  Radius of line 5 at 3.16 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.06  241.36  38.45
4.3  Radius of line 6 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.93  241.44  38.31
4.3  Radius of line 7 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.8  241.53  38.17
4.3  Radius of line 1013 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.32  241.13  38.84
4.3  Radius of line 1014 at 3.09 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  262.05  241.08  38.5
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  261.32  241.13  38.84
2.4  Seg length ending at pt. 916 >= 6.0 stdevs above mean at 2.0475.  (no action taken)
     B1      X, Y, Z:  261.08  241.53  40.35
2.4  Seg length ending at pt. 917 >= 6.0 stdevs above mean at 1.2915.  (no action taken)
     B1      X, Y, Z:  261.06  241.59  41.64
2.4  Seg length ending at pt. 994 >= 6.0 stdevs above mean at 1.6615.  (no action taken)
     B1      X, Y, Z:  261.25  241.62  36.82
2.4  Seg length ending at pt. 995 >= 6.0 stdevs above mean at 1.1743.  (no action taken)
     B1      X, Y, Z:  261.35  241.61  35.65
2.5  Seg length ending at pt. 1013 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  261.32  241.13  38.84
2.4  Seg length ending at pt. 1550 >= 6.0 stdevs above mean at 1.203.  (no action taken)
     B1      X, Y, Z:  244.69  242.19  9.65
2.4  Seg length ending at pt. 1765 >= 6.0 stdevs above mean at 1.0933.  (no action taken)
     B1      X, Y, Z:  251.37  229.34  13.83
2.4  Seg length ending at pt. 1980 >= 6.0 stdevs above mean at 1.095.  (no action taken)
     B1      X, Y, Z:  252.31  232.06  26.19
2.6  Line 1714 and line 1728 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  246.4  228.71  8.1
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  261.32  241.13  38.84
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 15
Number of type B2 irregularities = 0
Number of type C irregularities = 0
