# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_4.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  47.11  210.69  26.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.73  210.61  26.26
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.78  210.62  26.29
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.89  210.64  26.36
4.3  Radius of line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.11  210.69  26.5
4.5  Radius of terminal line 1695 at 0.171 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  50.47  206.0  5.74
2.5  Seg length ending at pt. 3 <= 0.1 at 0.07.  (removed)
     A       X, Y, Z:  46.73  210.61  26.26
2.4  Seg length ending at pt. 792 >= 6.0 stdevs above mean at 1.0991.  (no action taken)
     B1      X, Y, Z:  41.71  229.5  40.11
2.4  Seg length ending at pt. 1672 >= 6.0 stdevs above mean at 1.3184.  (no action taken)
     B1      X, Y, Z:  49.81  208.09  7.57
2.6  Line 1 and line 6 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  47.11  210.69  26.5
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  46.67  210.59  26.23
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
