# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_38.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_38.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  45.75  69.45  30.5
4.3  Radius of line 2 at 3.127 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.5  69.64  30.3
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.63  69.54  30.39
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.75  69.45  30.5
4.3  Radius of line 5 at 2.92 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.15  69.93  29.87
4.3  Radius of line 6 at 2.755 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  46.47  70.31  29.6
4.3  Radius of line 264 at 2.711 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.95  69.43  30.46
4.3  Radius of line 417 at 2.979 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  45.21  69.79  30.19
4.3  Radius of line 418 at 2.869 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.95  69.98  30.19
4.3  Radius of line 419 at 2.779 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.75  70.23  30.23
4.3  Radius of line 420 at 2.7 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  44.64  70.51  30.28
4.5  Radius of terminal line 2204 at 0.171 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  35.75  73.84  48.57
2.4  Seg length ending at pt. 181 >= 6.0 stdevs above mean at 1.1972.  (no action taken)
     B1      X, Y, Z:  48.64  75.56  22.67
2.5  Seg length ending at pt. 675 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  28.92  63.99  41.49
2.4  Seg length ending at pt. 1229 >= 6.0 stdevs above mean at 1.1388.  (no action taken)
     B1      X, Y, Z:  39.02  81.43  37.2
2.5  Seg length ending at pt. 1672 <= 0.1 at 0.0831.  (removed)
     A       X, Y, Z:  35.95  76.82  21.1
2.4  Seg length ending at pt. 2026 >= 6.0 stdevs above mean at 1.1454.  (no action taken)
     B1      X, Y, Z:  49.34  80.12  40.25
2.4  Seg length ending at pt. 2142 >= 6.0 stdevs above mean at 1.3039.  (no action taken)
     B1      X, Y, Z:  42.46  75.04  40.42
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  45.75  69.45  30.5
2.1  Line 1671 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  35.93  76.89  21.14
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 18
Number of type B2 irregularities = 0
Number of type C irregularities = 0
