# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_32.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_32.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  145.3  118.9  36.5
4.3  Radius of line 2 at 3.23 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.5  119.09  36.21
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.3  118.9  36.5
4.3  Radius of line 4 at 2.974 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.5  119.0  36.57
4.3  Radius of line 126 at 2.828 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.09  119.0  36.71
4.3  Radius of line 518 at 3.124 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.69  119.4  36.03
4.3  Radius of line 519 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.9  119.7  35.96
4.3  Radius of line 520 at 2.976 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.9  120.0  35.93
4.3  Radius of line 521 at 2.916 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.0  120.4  35.96
4.3  Radius of line 522 at 2.864 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.09  120.7  36.0
4.3  Radius of line 523 at 2.817 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  146.19  121.0  36.03
4.5  Radius of terminal line 2391 at 0.191 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  153.09  125.4  43.93
2.4  Seg length ending at pt. 5 >= 6.0 stdevs above mean at 1.533.  (no action taken)
     B1      X, Y, Z:  144.8  118.9  35.07
2.4  Seg length ending at pt. 563 >= 6.0 stdevs above mean at 1.3073.  (no action taken)
     B1      X, Y, Z:  149.09  121.5  26.39
2.5  Seg length ending at pt. 636 <= 0.1 at 0.0755.  (removed)
     A       X, Y, Z:  145.33  124.23  18.94
2.4  Seg length ending at pt. 1584 >= 6.0 stdevs above mean at 1.3.  (no action taken)
     B1      X, Y, Z:  162.59  137.5  27.37
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  145.3  118.9  36.5
2.1  Line 635 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  145.35  124.25  19.01
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 17
Number of type B2 irregularities = 0
Number of type C irregularities = 0
