# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_20.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN14_microglia_20.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
4.3  Radius of line 2 at 3.052 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  183.8  178.0  27.53
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
4.5  Radius of terminal line 84 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
4.5  Radius of terminal line 216 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
2.4  Seg length ending at pt. 85 >= 6.0 stdevs above mean at 1.3859.  (no action taken)
     B1      X, Y, Z:  183.69  177.8  26.55
2.4  Seg length ending at pt. 216 >= 6.0 stdevs above mean at 1.3225.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
2.4  Seg length ending at pt. 431 >= 6.0 stdevs above mean at 1.4135.  (no action taken)
     B1      X, Y, Z:  186.5  161.09  19.57
2.7  Line 84 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  183.3  178.09  27.78
2.7  Line 216 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  183.3  178.09  27.78
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  183.3  178.09  27.78
2.6  Line 1258 and line 1273 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  200.9  158.3  42.0
2.6  Line 1485 and line 1493 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  167.8  187.5  40.1
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
