# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  217.59  282.69  24.3
4.3  Radius of line 2 at 3.149 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  217.3  282.6  24.35
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  217.44  282.64  24.33
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  217.59  282.69  24.3
4.3  Radius of line 5 at 3.004 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  218.09  283.39  24.62
4.3  Radius of line 251 at 2.86 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  218.5  283.8  25.01
4.3  Radius of line 1205 at 3.015 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  217.0  282.39  24.39
4.3  Radius of line 2044 at 2.911 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  216.8  282.1  24.42
4.5  Radius of terminal line 2505 at 0.167 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.5  266.69  12.41
2.4  Seg length ending at pt. 1184 >= 6.0 stdevs above mean at 1.7344.  (no action taken)
     B1      X, Y, Z:  217.59  283.0  22.64
2.4  Seg length ending at pt. 1185 >= 6.0 stdevs above mean at 1.1842.  (no action taken)
     B1      X, Y, Z:  217.59  283.1  21.46
2.5  Seg length ending at pt. 2169 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  210.09  270.1  37.18
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  217.59  282.69  24.3
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
