# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_17.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_17.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  145.69  29.98  43.02
4.5  Radius of terminal line 387 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.69  29.98  43.02
4.5  Radius of terminal line 390 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  145.69  29.98  43.02
2.4  Seg length ending at pt. 391 >= 6.0 stdevs above mean at 1.1739.  (no action taken)
     B1      X, Y, Z:  145.9  29.78  44.56
2.4  Seg length ending at pt. 980 >= 6.0 stdevs above mean at 2.16.  (no action taken)
     B1      X, Y, Z:  146.0  29.8  45.15
2.4  Seg length ending at pt. 981 >= 6.0 stdevs above mean at 1.3197.  (no action taken)
     B1      X, Y, Z:  146.0  29.64  46.46
2.7  Line 387 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  145.69  29.98  43.02
2.7  Line 390 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  145.69  29.98  43.02
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  145.69  29.98  43.02
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
