# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_13.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_13.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  116.0  105.9  39.1
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  115.84  105.84  39.12
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.0  105.9  39.1
4.5  Radius of terminal line 982 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  116.0  105.9  39.1
2.5  Seg length ending at pt. 281 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  136.65  106.15  44.84
2.4  Seg length ending at pt. 291 >= 6.0 stdevs above mean at 4.8625.  (no action taken)
     B1      X, Y, Z:  136.8  106.09  45.28
2.4  Seg length ending at pt. 1546 >= 6.0 stdevs above mean at 1.8835.  (no action taken)
     B1      X, Y, Z:  115.59  105.59  40.97
2.4  Seg length ending at pt. 1547 >= 6.0 stdevs above mean at 1.1494.  (no action taken)
     B1      X, Y, Z:  115.5  105.4  42.1
2.4  Seg length ending at pt. 2567 >= 6.0 stdevs above mean at 1.3284.  (no action taken)
     B1      X, Y, Z:  122.9  85.43  30.64
2.4  Seg length ending at pt. 2579 >= 6.0 stdevs above mean at 1.228.  (no action taken)
     B1      X, Y, Z:  122.7  85.62  31.67
2.7  Line 982 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  116.0  105.9  39.1
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  116.0  105.9  39.1
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
