# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_12.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_12.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  98.37  169.19  25.23
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.15  169.34  25.46
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.37  169.19  25.23
4.5  Radius of terminal line 705 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  98.37  169.19  25.23
2.4  Seg length ending at pt. 5 >= 6.0 stdevs above mean at 1.2504.  (no action taken)
     B1      X, Y, Z:  98.45  169.4  26.46
2.4  Seg length ending at pt. 284 >= 6.0 stdevs above mean at 1.1797.  (no action taken)
     B1      X, Y, Z:  110.59  159.4  24.57
2.4  Seg length ending at pt. 364 >= 6.0 stdevs above mean at 1.1701.  (no action taken)
     B1      X, Y, Z:  107.0  154.09  33.82
2.4  Seg length ending at pt. 705 >= 6.0 stdevs above mean at 1.2504.  (no action taken)
     B1      X, Y, Z:  98.37  169.19  25.23
2.4  Seg length ending at pt. 1628 >= 6.0 stdevs above mean at 1.3755.  (no action taken)
     B1      X, Y, Z:  97.37  170.59  34.63
2.4  Seg length ending at pt. 1646 >= 6.0 stdevs above mean at 1.4075.  (no action taken)
     B1      X, Y, Z:  97.82  172.3  42.6
2.7  Line 705 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  98.37  169.19  25.23
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  98.37  169.19  25.23
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
