# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN13_microglia_11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  129.59  13.42  37.57
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  129.59  13.42  37.57
4.5  Radius of terminal line 532 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  129.59  13.42  37.57
2.4  Seg length ending at pt. 348 >= 6.0 stdevs above mean at 1.2084.  (no action taken)
     B1      X, Y, Z:  129.9  9.36  43.47
2.4  Seg length ending at pt. 591 >= 6.0 stdevs above mean at 1.2376.  (no action taken)
     B1      X, Y, Z:  126.29  12.51  40.38
2.5  Seg length ending at pt. 1011 <= 0.1 at 0.0762.  (removed)
     A       X, Y, Z:  135.32  14.36  35.0
2.4  Seg length ending at pt. 1898 >= 6.0 stdevs above mean at 1.1936.  (no action taken)
     B1      X, Y, Z:  135.0  22.87  32.22
2.7  Line 532 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  129.59  13.42  37.57
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  129.59  13.42  37.57
2.1  Line 1010 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  135.25  14.36  35.03
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
