# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN12_microglia_19.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN12_microglia_19.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
4.3  Radius of line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.05  168.1  36.78
4.5  Radius of terminal line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
4.5  Radius of terminal line 1523 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
2.4  Seg length ending at pt. 8 >= 6.0 stdevs above mean at 1.1924.  (no action taken)
     B1      X, Y, Z:  134.9  167.75  35.65
2.5  Seg length ending at pt. 793 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  144.89  179.84  11.44
2.4  Seg length ending at pt. 804 >= 6.0 stdevs above mean at 3.785.  (no action taken)
     B1      X, Y, Z:  144.9  179.9  10.98
2.4  Seg length ending at pt. 1420 >= 6.0 stdevs above mean at 1.2417.  (no action taken)
     B1      X, Y, Z:  135.59  167.9  37.85
2.4  Seg length ending at pt. 1462 >= 6.0 stdevs above mean at 1.8398.  (no action taken)
     B1      X, Y, Z:  135.3  168.0  38.6
2.4  Seg length ending at pt. 1523 >= 6.0 stdevs above mean at 1.1594.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
2.4  Seg length ending at pt. 1524 >= 6.0 stdevs above mean at 1.5966.  (no action taken)
     B1      X, Y, Z:  134.8  168.3  39.07
2.4  Seg length ending at pt. 1525 >= 6.0 stdevs above mean at 1.1893.  (no action taken)
     B1      X, Y, Z:  134.69  168.4  40.25
2.5  Seg length ending at pt. 2457 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  99.87  191.3  46.22
2.7  Line 7 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  135.09  168.3  37.5
2.7  Line 1523 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  135.09  168.3  37.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  135.09  168.3  37.5
2.6  Line 4 and line 6 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  135.05  168.1  36.78
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 14
Number of type B2 irregularities = 0
Number of type C irregularities = 0
