# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN12_microglia_12.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN12_microglia_12.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  86.42  160.0  23.39
4.5  Radius of terminal line 395 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.42  160.0  23.39
4.5  Radius of terminal line 558 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  86.42  160.0  23.39
2.4  Seg length ending at pt. 395 >= 6.0 stdevs above mean at 1.5903.  (no action taken)
     B1      X, Y, Z:  86.42  160.0  23.39
2.4  Seg length ending at pt. 559 >= 6.0 stdevs above mean at 1.5732.  (no action taken)
     B1      X, Y, Z:  86.42  159.9  21.82
2.7  Line 395 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  86.42  160.0  23.39
2.7  Line 558 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  86.42  160.0  23.39
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  86.42  160.0  23.39
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 6
Number of type B2 irregularities = 0
Number of type C irregularities = 0
