# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_8.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_8.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  97.73  225.8  14.5
4.5  Radius of terminal line 438 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.73  225.8  14.5
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 1.3034.  (no action taken)
     B1      X, Y, Z:  97.95  225.69  15.78
2.4  Seg length ending at pt. 438 >= 6.0 stdevs above mean at 1.3034.  (no action taken)
     B1      X, Y, Z:  97.73  225.8  14.5
2.5  Seg length ending at pt. 563 <= 0.1 at 0.0911.  (removed)
     A       X, Y, Z:  107.95  230.52  28.68
2.4  Seg length ending at pt. 805 >= 6.0 stdevs above mean at 1.0892.  (no action taken)
     B1      X, Y, Z:  101.0  233.4  32.36
2.7  Line 438 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  97.73  225.8  14.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.73  225.8  14.5
2.1  Line 562 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  107.9  230.55  28.61
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
