# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_7.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_7.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  147.8  141.8  18.44
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.42  141.94  18.7
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.55  141.9  18.61
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.8  141.8  18.44
4.5  Radius of terminal line 708 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  147.8  141.8  18.44
2.4  Seg length ending at pt. 323 >= 6.0 stdevs above mean at 1.1992.  (no action taken)
     B1      X, Y, Z:  163.5  155.8  42.47
2.4  Seg length ending at pt. 888 >= 6.0 stdevs above mean at 1.1136.  (no action taken)
     B1      X, Y, Z:  161.5  132.19  39.14
2.4  Seg length ending at pt. 900 >= 6.0 stdevs above mean at 1.1743.  (no action taken)
     B1      X, Y, Z:  161.4  130.69  41.39
2.5  Seg length ending at pt. 2264 <= 0.1 at 0.1.  (removed)
     A       X, Y, Z:  148.09  139.3  44.22
2.7  Line 708 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  147.8  141.8  18.44
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  147.8  141.8  18.44
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
