# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_40.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_40.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  200.69  240.5  50.14
4.3  Radius of line 2 at 3.085 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.0  240.9  50.28
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.84  240.69  50.21
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.69  240.5  50.14
4.3  Radius of line 5 at 3.081 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.19  240.59  50.5
4.5  Radius of terminal line 608 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.69  240.5  50.14
2.4  Seg length ending at pt. 155 >= 6.0 stdevs above mean at 1.0554.  (no action taken)
     B1      X, Y, Z:  216.0  225.19  45.99
2.4  Seg length ending at pt. 387 >= 6.0 stdevs above mean at 1.0837.  (no action taken)
     B1      X, Y, Z:  208.59  226.09  31.73
2.4  Seg length ending at pt. 1029 >= 6.0 stdevs above mean at 1.0238.  (no action taken)
     B1      X, Y, Z:  200.5  242.5  47.89
2.7  Line 608 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  200.69  240.5  50.14
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.69  240.5  50.14
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
