# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_35.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_35.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  168.0  221.69  42.0
4.5  Radius of terminal line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.0  221.69  42.0
4.5  Radius of terminal line 695 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.0  221.69  42.0
4.5  Radius of terminal line 868 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.0  221.69  42.0
2.4  Seg length ending at pt. 883 >= 6.0 stdevs above mean at 1.2606.  (no action taken)
     B1      X, Y, Z:  166.69  224.3  49.4
2.4  Seg length ending at pt. 1247 >= 6.0 stdevs above mean at 1.0659.  (no action taken)
     B1      X, Y, Z:  149.59  226.0  26.89
2.7  Line 7 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  168.0  221.69  42.0
2.7  Line 695 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  168.0  221.69  42.0
2.7  Line 868 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  168.0  221.69  42.0
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.0  221.69  42.0
2.6  Line 4 and line 6 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  168.15  221.72  41.98
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
