# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  205.3  141.59  33.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  205.3  141.59  33.5
4.5  Radius of terminal line 1989 at 0.161 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.69  171.69  28.35
2.4  Seg length ending at pt. 375 >= 6.0 stdevs above mean at 1.22.  (no action taken)
     B1      X, Y, Z:  200.69  115.7  31.19
2.4  Seg length ending at pt. 831 >= 6.0 stdevs above mean at 1.1649.  (no action taken)
     B1      X, Y, Z:  189.09  131.3  10.67
2.4  Seg length ending at pt. 836 >= 6.0 stdevs above mean at 1.0746.  (no action taken)
     B1      X, Y, Z:  189.09  131.3  10.89
2.5  Seg length ending at pt. 1249 <= 0.1 at 0.0877.  (removed)
     A       X, Y, Z:  179.44  123.64  19.21
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  205.3  141.59  33.5
2.1  Line 1248 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  179.4  123.69  19.27
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
