# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN11_microglia_11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  229.0  116.4  21.3
4.3  Radius of line 2 at 3.113 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.0  116.7  21.0
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.0  116.55  21.15
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.0  116.4  21.3
4.3  Radius of line 5 at 2.986 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  229.59  116.0  22.3
4.5  Radius of terminal line 2277 at 0.17 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.9  129.69  21.28
2.4  Seg length ending at pt. 5 >= 6.0 stdevs above mean at 1.228.  (no action taken)
     B1      X, Y, Z:  229.59  116.0  22.3
2.5  Seg length ending at pt. 485 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  235.42  114.7  49.14
2.4  Seg length ending at pt. 502 >= 6.0 stdevs above mean at 1.2042.  (no action taken)
     B1      X, Y, Z:  235.5  114.7  50.28
2.4  Seg length ending at pt. 1246 >= 6.0 stdevs above mean at 1.2022.  (no action taken)
     B1      X, Y, Z:  241.8  94.06  23.55
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  229.0  116.4  21.3
2.1  Line 484 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  235.4  114.7  49.08
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
