# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_35.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_35.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  239.4  130.4  29.5
4.3  Radius of line 2 at 3.253 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  239.69  130.4  29.42
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  239.4  130.4  29.5
4.5  Radius of terminal line 1350 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  239.4  130.4  29.5
4.3  Radius of line 1689 at 3.154 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  240.0  130.3  29.26
2.4  Seg length ending at pt. 1406 >= 6.0 stdevs above mean at 1.1569.  (no action taken)
     B1      X, Y, Z:  239.69  121.5  39.17
2.5  Seg length ending at pt. 2273 <= 0.1 at 0.0883.  (removed)
     A       X, Y, Z:  246.22  127.02  29.2
2.7  Line 1350 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  239.4  130.4  29.5
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  239.4  130.4  29.5
2.1  Line 2272 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  246.15  127.04  29.25
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
