# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_23.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_23.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  144.8  213.4  43.56
4.5  Radius of terminal line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.8  213.4  43.56
4.5  Radius of terminal line 369 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  144.8  213.4  43.56
2.4  Seg length ending at pt. 294 >= 6.0 stdevs above mean at 1.2904.  (no action taken)
     B1      X, Y, Z:  145.4  213.5  42.57
2.4  Seg length ending at pt. 369 >= 6.0 stdevs above mean at 1.1619.  (no action taken)
     B1      X, Y, Z:  144.8  213.4  43.56
2.5  Seg length ending at pt. 1345 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  173.09  213.9  18.94
2.7  Line 7 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  144.8  213.4  43.56
2.7  Line 369 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  144.8  213.4  43.56
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  144.8  213.4  43.56
2.6  Line 4 and line 6 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  144.65  213.15  43.56
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
