# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_18.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_18.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  289.6  219.9  35.38
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  289.6  219.9  35.38
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  289.35  219.69  35.45
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  289.6  219.9  35.38
2.5  Seg length ending at pt. 1271 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  274.77  228.5  31.18
2.4  Seg length ending at pt. 1487 >= 6.0 stdevs above mean at 1.1569.  (no action taken)
     B1      X, Y, Z:  274.89  230.9  33.29
2.4  Seg length ending at pt. 2172 >= 6.0 stdevs above mean at 1.2779.  (no action taken)
     B1      X, Y, Z:  297.5  226.8  24.71
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  289.6  219.9  35.38
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  289.6  219.9  35.38
2.6  Line 1553 and line 1561 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  274.6  236.69  28.21
2.1  Line 1270 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  274.85  228.5  31.19
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
