# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_13.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN10_microglia_13.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  168.09  24.94  29.89
4.5  Radius of terminal line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.09  24.94  29.89
4.5  Radius of terminal line 939 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.09  24.94  29.89
2.4  Seg length ending at pt. 8 >= 6.0 stdevs above mean at 1.6703.  (no action taken)
     B1      X, Y, Z:  168.5  24.71  27.78
2.4  Seg length ending at pt. 782 >= 6.0 stdevs above mean at 1.2651.  (no action taken)
     B1      X, Y, Z:  168.09  25.6  28.48
2.4  Seg length ending at pt. 939 >= 6.0 stdevs above mean at 1.5568.  (no action taken)
     B1      X, Y, Z:  168.09  24.94  29.89
2.4  Seg length ending at pt. 1286 >= 6.0 stdevs above mean at 1.1082.  (no action taken)
     B1      X, Y, Z:  159.09  29.28  38.28
2.7  Line 7 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  168.09  24.94  29.89
2.7  Line 939 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  168.09  24.94  29.89
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.09  24.94  29.89
2.6  Line 4 and line 6 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  168.25  24.78  29.43
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
